#26 · Genomics
Chromosome-scale genomes reveal organelle-host metabolism and sex chromosome evolution
The dominant thread is genome architecture resolved at assembly level and interpreted mechanistically. The Braarudosphaera bigelowii preprint assembles 472.1-Mb nuclear and organellar genomes for a nitroplast-hosting haptophyte and relates them to remodeling of nitrogen metabolism. The Polytrichaceae preprint uses ancient U/V sex chromosomes in haploid mosses to show slow expansion of recombination suppression. The Warnstorfia fluitans preprint reports a 725 Mb de novo assembly with 30,421 predicted genes plus chloroplast and mitochondrial genomes. The published zygnematophycean study, using 104 transcriptomes across 2243 loci, contributes phylogenomic framing of algal relatives of land plants rather than assembly-level detail. The Arctic adaptation preprint reports convergent selection without assembly-level results and is not part of this thread. What is new is linking resolved genome structure to organelle-host metabolism and recombination history.
Published papers
A deep genetic structure phylogenomically frames the closest algal relatives of land plants.
Phylogenomic analysis of 104 zygnematophycean transcriptomes (43 newly sequenced) across 2243 loci reveals deep genetic structure and ancient radiations in…
Preprints
The Braarudosphaera bigelowii genome reveals cellular remodeling around a nitrogen-fixing organelle
Assembles 472.1-Mb nuclear and organellar genomes of nitroplast-hosting haptophyte B. bigelowii, revealing nitrogen metabolism remodeling.
Shared genomic signatures of Arctic adaptation among distantly related plant lineages
Extreme environments impose strong selection pressures that can drive convergent adaptation among distantly related species.
Ancient U/V sex chromosomes reveal slow expansion of recombination suppression in Polytrichaceae mosses.
Sex chromosomes evolving in haploid versus diploid life cycles provide complementary systems for testing theories of sex chromosome evolution, yet haploid sex c
De novo genome assembly of the floating-hook moss Warnstorfia fluitans
De novo 725 Mb assembly of the moss Warnstorfia fluitans: 30,421 predicted genes, plus chloroplast and mitochondrial genomes.
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