Top 40
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Single-cell
Benchmarks test whether perturbation models capture mechanism and intervention geometry
Recent preprints test whether single-cell and virtual-cell models generalize beyond expression similarity to mechanism and unseen interventions.
ML / AI methods
Benchmarks expose generalization limits of protein, peptide and RNA structure and…
Recent preprints and a 2026 RNA benchmark test whether structure and function predictors generalize beyond their training distributions.
ML / AI methods
Embedding biological structure in learned models for interpretable omics prediction
Recent preprints and publications test whether learned representations of omics and clinical data reflect biological structure.
Structural bio & protein design
Ensemble and topology-aware models advance protein binding and interface prediction
Recent preprints and papers pair structural ensembles, MD trajectories, and AlphaFold3 models with learned predictors of binding sites and affinity.
Genomics
Cell division history and genomic context shape epigenetic noise across tissues
Recent preprints and papers quantify how replication history, mutation susceptibility and regulatory evolution vary across tissues and lineages.