Top 40
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Transcriptomics
Computational control of cell-level inference errors in spatial transcriptomics
Segmentation, molecule assignment and label transfer errors are now addressed by explicit benchmarks and new spatial inference tools.
Genomics
Pangenome-based detection and benchmark comparisons reshape variant call evaluation
Haplotype-resolved pangenome references and parameter-sensitive SV benchmarks now define how variant calls are detected and judged.
Genomics
Long-read and pooled sequencing workflows resolve non-model genome assemblies
Four September 2026 preprints benchmark or apply long-read and pooled sequencing to non-model genome assembly across ticks, invertebrates, fish, and eucalypts.
Single-cell
Graph, lineage and sequence priors constrain single-cell inference across modalities
Recent preprints couple single-cell readouts with prior structure, from regulatory graphs and lineage trees to metabolic topology and sequence models.
ML / AI methods
Benchmarks expose generalization limits of deep learning in protein modeling
Leakage-controlled and uncertainty-aware benchmarks now test protein language models and deep learners across structure, binding and metabolism tasks.