Top 40
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Single-cell
Benchmarks and pipelines reshape single-cell and spatial transcriptomics analysis
Recent benchmarks and tools address reliability and resolution in single-cell and spatial transcriptomics across tissues, platforms, and degraded samples.
Systems biology
Multiomic profiling links aging biomarkers to gene regulatory network changes
Expanded multiomic and proteomic resources now enable trait-linked dissection of aging, vascular remodelling and regulatory network rewiring.
Single-cell
Encoding mechanistic structure into models to interrogate drug and perturbation responses
Single-cell perturbation and drug-response models are being built with explicit biological structure, and benchmarks now temper architecture-specific claims.
ML / AI methods
Learned models for protein sequence, structure, and spectra prediction tasks
Recent preprints apply transformers, graph networks, and fine-tuned language models to proteomics, structure-based binding, and degradation prediction tasks.
ML / AI methods
LLM agents tested on protein design, CRISPR screen and RNA structure tasks
Recent preprints benchmark LLM agents on protein design tools, ADMET prediction, CRISPR screens and RNA 3D folding, exposing gaps against published results.